Bioinformatics Resources
| Online Resource | Web Address | Description |
|---|---|---|
Biodiversity Information Standards (TDWG) |
TDWG group home page, with links to many projects and information on conferences. |
|
Biodiversity Information Standards (TDWG) Standards |
Links to pages of groups working on various biodiversity information standards, such as Darwin Core, TAPIR, etc. |
|
Biodiversity Information Standards (TDWG), 2011 conference presentations |
2011 TDWG conference presentations are available online. Reference the program to find presentations of interest: http://www.tdwg.org/conference2011/program/. |
|
Global Biodiversity Information Facility (GBIF) |
Provides and encourages access to biodiversity collections and data online, including map shapefiles. |
|
Biological Collection Access Services (BioCASE) |
Provides online access to European collections and observations data. |
|
Atlas of Living Australia |
Online access to biodiversity information on Australian faunas, including ecological niche models, collections and observation data, and structured querying of data. |
|
VertNet |
Network coordinating access to vertebrate collections data worldwide. |
|
USGS Biological Informatics Program |
Provides coordination of federal biological collections, including a new effort – "BISON" – Biodiversity Information Serving Our Nation. |
|
iDigBio |
The national resource for advancing digitization of biological collections, coordinating all ADBC efforts and developing standards and procedures for managing and serving those data. |
|
Biodiversity Heritage Library |
Consortium of libraries digitizing literature for online access. This is part of the EOL initiative. |
|
Encyclopedia of Life |
Initiative to provide an online presence for all described species. |
|
Minimum Information About a Phylogenetic Analysis Standard (MIAPA) |
http://wiki.tdwg.org/twiki/bin/view/ Phylogenetics/MIAPAWorkshop2011 |
Working group to develop standards for repeatability of phylogenetic analyses. |
NY Botanical Gardens Digital Imaging |
Digital imaging and archiving procedures from the New York Botanical Gardens. |
|
Islandora |
A digital data repository for biodiversity resources, including ways to intersect user space and data space to enable various kinds of sharing. |
|
CalBug |
Arthropod digitization effort of UC Berkeley collections, part of the NSF – ADBC thematic collection networks. |
|
Morphster |
To develop a demonstration prototype of a service-oriented architecture enabling and supporting morphologically based phylogenetic studies. |
|
iPlant Collaborative |
Cyberinfrastructure and computational tools to support plant science. |
|
iPlant Collaborative, Taxonomic Name Resolution Service |
A utility for correcting and standardizing plant taxonomic names. |
|
Moorea Biocode |
A comprehensive inventory of non-microbial life, presenting substantial challenges for collecting, managing, and serving biological data. |
|
BiSciCol |
BiSciCol (Biological Science Collections) Tracker is a funded NSF collaborative project with the goal of building an infrastructure designed to tag and track scientific collections and all of their derivatives." |
|
Map of Life |
Creating a platform and set of resources for the development of distribution maps and tools for creating, distributing, and querying them. |
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DataONE |
Intended to be "a distributed framework and sustainable cyberinfrastructure that meets the needs of science and society for open, persistent, robust, and secure access to well-described and easily discovered Earth observational data." |
|
OpenUp! Europeana Collections |
A project to provide data standards for European natural history collections images, making them accessible to the EUROPEANA community. |
|
Symbiota |
A software project that aims to build web-based tools for building specimen-based virtual floras and faunas. It is seen as a way for smaller collections to share with larger projects as well, such as GBIF. |
